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Sensitivity and specificity of histology for diagnoses of four common pathogens and detection of nontarget pathogens in adult Chinook salmon (Oncorhynchus tshawytscha) in fresh water

机译:组织学对四种常见病原体诊断的敏感性和特异性以及在淡水中检测成年大麻哈鱼(Oncorhynchus tshawytscha)中的非靶病原体

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摘要

Histology is often underutilized in aquatic animal disease screening and diagnostics. The agreement between histological classifications of infection and results using diagnostic testing from the American Fisheries Society's Blue Book was conducted with 4 common salmon pathogens: Aeromonas salmonicida, Renibacterium salmoninarum, Ceratomyxa shasta, and Nanophyetus salmincola. Adult Chinook salmon (Oncorhynchus tshawytscha) in Oregon were evaluated, and agreement between tests was calculated. Live and dead (both pre- and postspawning) salmon were collected from the Willamette River, Oregon, its tributaries, the Willamette Hatchery, and after holding in cool, pathogen-free water during maturation at Oregon State University. Sensitivity and specificity of histology compared to Blue Book methods for all fish, live fish only, and dead (pre- and postspawned combined) fish only were, respectively, as follows: A. salmonicida (n = 105): specificity 87.5%, 87.5%, 87.5% and sensitivity 38.6%, 14.8%, 60.0%; R. salmoninarum (n = 111): specificity 91.9%, 85.7%, 97.7% and sensitivity 16.0%, 7.1%, 27.2%; C. shasta (n = 136): specificity 56.0%, 63.3%, 28.6% and sensitivity 83.3%, 86.2%, 71.4%; N. salmincola (n = 228): specificity 68.2%, 66.7%, not possible to calculate for dead fish and sensitivity 83.5%, 80.5%, 87.3%. The specificity was good for bacterial pathogens. This was not the case for C. shasta, likely due to detection of presporogenic forms only by histology. Sensitivity of histology for bacterial pathogens was low with the exception of dead fish with A. salmonicida. Kappa analysis for agreement between Blue Book and histology methods was poor to moderate. However, histological observations revealed the presence of other pathogens that would not be detected by other methods.
机译:组织学在水生动物疾病的筛查和诊断中常常未被充分利用。感染的组织学分类与使用美国渔业协会蓝皮书的诊断测试结果之间的一致性是针对四种常见的鲑鱼病原体进行的:鲑鱼气单胞菌,沙门氏菌,沙雷氏菌和盐藻纳米藻。对俄勒冈州的成年奇努克鲑鱼(Oncorhynchus tshawytscha)进行了评估,并计算了两次试验之间的一致性。从俄勒冈州威拉米特河,其支流威拉米特孵化场收集活鱼和死鲑(产前和产后),并在俄勒冈州立大学成熟期间将其保存在凉爽,无病原的水中。与蓝皮书方法相比,仅对所有鱼类,仅活鱼和死鱼(典当前和典当后组合)的组织学敏感性和特异性分别为:A.鲑科(n = 105):特异性87.5%,87.5 %,87.5%和灵敏度38.6%,14.8%,60.0%;沙门氏菌(n = 111):特异性91.9%,85.7%,97.7%和敏感性16.0%,7.1%,27.2%; C.shasta(n = 136):特异性56.0%,63.3%,28.6%和敏感性83.3%,86.2%,71.4%;沙门氏菌(n = 228):特异性68.2%,66.7%,无法计算死鱼,敏感性为83.5%,80.5%,87.3%。对细菌病原体的特异性很好。 Shasta并非如此,可能是由于仅通过组织学检测到了致孢子形式。组织学对细菌性病原体的敏感性很低,除了带有鲑鱼的死鱼。关于蓝皮书和组织学方法之间一致性的卡帕分析差强人意。但是,组织学观察显示存在其他病原体,而其他病原体无法通过其他方法检测到。

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